SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 55 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09263 (8R,8'R,9'S)-5-Methoxyclusin 432.1802 13.582e-16
P09291 Jasminoside A 330.1678 11.455e-12
P09299 Cervinomycin A1 529.1419 14.868e-14
P09302 Indomethacin 357.0772 11.164e-11
P09306 6Z-octenoic acid 142.0971 11.954e-13
P09328 Methylglyoxal-bis-guanylhydrazone 170.0923 19.377e-14
P09330 Aclatonium 217.1286 19.898e-14
P09334 1-(Pentafluorophenyl)propane 210.0481 15.432e-18
P09365 Leucyl-Aspartate 246.1187 17.955e-12
P09373 No candidate annotation 475.2201 15.535e-13