SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 40 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06998 4-Aminophenylacetic acid 151.0607 18.237e-11
P07022 Melrosin A 476.1705 13.294e-12
P07033 AICAR 338.0620 19.106e-17
P07050 (Z)-But-2-ene-1,2,3-tricarboxylate 188.0322 18.53e-15
P07076 N-(eicosanoyl)-1-deoxysphing-4-enine 577.5708 12.232e-16
P07081 O-Methylisoalangiside 519.2037 12.027e-12
P07083 Thioxanthen-9-one 212.0298 11.269e-12
P07089 O-Methylisoalangiside 519.2054 11.215e-12
P07091 No candidate annotation 799.2130 14.248e-13
P07092 AB-MECA 399.1660 16.499e-11