Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06998

Metabolite ID
P06998
Deionized mass
151.0607 Da
Average m/z
152.0683
Average RT
9.2558
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.51e-13
Glyma.09G058900 hypothetical protein NA 2Chr09:5397968–5404650 (-)5.944e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.809e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.772e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.772e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.35e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.317e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.31e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.237e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)4.082e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)5.671e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.11e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.637e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.754e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.754e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.754e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.06e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.06e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)6.35e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.744e-13
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.238e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)3.023e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)3.023e-12
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.549e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.549e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.46e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.575e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.575e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.761e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.161e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.161e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.204e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.204e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.772e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.915e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.575e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.915e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.915e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.517e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.762e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)8.727e-12
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)2.791e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)5.47e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)5.47e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.687e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.925e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)4.922e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.565e-12
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)5.908e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)2.9e-12
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)3.61e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.179e-15
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)1.245e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.5e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.5e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.039e-12