SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 359 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54137 No candidate annotation 641.2707 12.398e-12
P54184 Majapolene A 330.0792 12.859e-12
P54190 NADPH 745.0799 11.887e-12
P54222 No candidate annotation 671.1509 16.288e-13
P54246 N-(2-hydroxy-docosanoyl)-4E,6E-hexadecasphingadienine 607.5476 11.86e-12
P54256 Tiegusanin E 650.2704 11.613e-11
P54259 (5alpha)-27-norcholest-25en-2beta,3alpha,6alpha-triyl tris(hydrogen sulfate) 644.2000 14.732e-18
P54286 GDC-0834 Racemate 596.2592 14.903e-11
P54338 1-(9Z-nonadecenoyl)-glycero-3-phosphate 450.2737 13.073e-12
P54352 1-[(6-Chloro-2-methoxyacridin-9-yl)amino]-3-(diethylamino)propan-2-ol 387.1730 16.177e-12