SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 349 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52185 Reproterol 389.1693 15.329e-11
P52192 3-(3-Methyl-5-pentylfuran-2-yl)propanoylcarnitine 367.2322 18.107e-11
P52212 2-Chloro-N-icosa-5,8,11,14-tetraenylacetamide 365.2460 19.08e-12
P52231 QUINGESTANOL 366.2508 15.573e-14
P52233 No candidate annotation 232.6061 13.471e-15
P52235 Carindone 512.3129 11.11e-11
P52281 Albovionitine 389.2567 15.021e-13
P52305 4-Vinylcyclohexene 108.0926 12.541e-11
P52336 (2R,3R,5S)-1,2,3,5,6-Pentahydroxyheptan-4-one 194.0794 11.604e-11
P52342 1,2-di-(6Z,9Z,12Z,15Z-octadecatetraenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 762.4424 13.333e-14