SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 31 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05800 Slaframine 198.1344 12.269e-11
P05821 Pandangolide 3 362.1408 12.261e-14
P05830 10-Oxabenzo[def]chrysen-9-one 270.0680 16.568e-12
P05831 2-Methacryloyloxyethyl phosphorylcholine 295.1190 12.279e-11
P05833 Modafinil 273.0835 17.355e-12
P05841 Urate radical 167.0193 14.466e-14
P05844 Octanedioylcarnitine 317.1879 17.016e-16
P05856 Midodrine 254.1227 14.226e-15
P05863 (E)-1-[3-(Chloromethylene)-2,3-dihydro-1-benzoxepin-7-yl]-ethanone 234.0468 11.505e-16
P05872 Formebolone 344.2031 13.095e-16