SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 30 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05719 No candidate annotation 256.5781 18.129e-11
P05720 Hicksoane B 482.1159 15.527e-14
P05722 (-)-Echinobetaine A 175.1198 15.689e-14
P05741 Nitrogen mustard N-oxide 171.0221 16.024e-16
P05742 (Salicyl)adenylate 467.0872 18.599e-14
P05765 Lycomarasmine B 277.0881 11.384e-17
P05770 1-Methylpiperidin-4-yl butanoate 185.1403 11.666e-13
P05775 Nitrobenzylmercaptopurine 287.0506 11.195e-11
P05782 N-Hydroxyannomontine 277.0960 12.497e-15
P05790 No candidate annotation 384.9855 15.159e-11