SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 269 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39100 Liangshanin C 372.1898 11.742e-11
P39108 Se-Adenosylselenomethionine 446.0805 18.309e-12
P39129 3R-hydroxy-9R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 477.2365 12.016e-12
P39131 Clobenpropit 308.0873 14.401e-12
P39155 No candidate annotation 706.3398 13.727e-15
P39157 2-Cyanomethylene-1-glucosyloxy-3-hydroxy-4,5-dimethoxycyclohexane 375.1531 18.068e-14
P39176 Microtoenin C 941.5023 11.615e-13
P39185 Intoplicine 348.1953 13.399e-12
P39209 2-Propylphenol 136.0879 15.652e-12
P39215 Alstonoxine B 330.1905 16.438e-14