SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 254 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P36809 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1488 17.629e-11
P36832 dTDP-4-deoxy-4-thio-alpha-D-digitoxose 548.0718 13.178e-11
P36851 No candidate annotation 104.0253 13.737e-12
P36871 Triquetroside C1 918.4797 19.153e-11
P36874 No candidate annotation 755.3385 16.53e-13
P36877 Streptovirudin B2 802.3931 16.559e-15
P36894 N3'-Acetyltobramycin 509.2711 15.6e-12
P36912 Rhodojaponin IV 454.2533 18.269e-16
P36928 Ligujapone 202.0983 18.563e-23
P36949 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2418 12.941e-13