Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36894

Metabolite ID
P36894
Deionized mass
509.2711 Da
Average m/z
510.2804
Average RT
18.3584
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
79
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

79 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.795e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.702e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.736e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.706e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)4.755e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.795e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)5.123e-12
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 1Chr02:693193–700260 (+)8.135e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.858e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.518e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.887e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.105e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)6.079e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.492e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.492e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.6e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.663e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.663e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.663e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)5.429e-15
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.092e-17
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.781e-17
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.718e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.162e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.699e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.702e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.702e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.702e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.702e-14
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.848e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)2.046e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)2.046e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.532e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)6.464e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.158e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.158e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.158e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.158e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.59e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.358e-13
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)1.082e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)9.045e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.087e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)4.686e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.888e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)1.303e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.692e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.692e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.692e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)7.511e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.595e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.111e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.706e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.755e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.157e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.688e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.157e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.157e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.991e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.048e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.459e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.873e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.873e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.246e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.246e-12
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)2.36e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.45e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.448e-12
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)5.12e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.742e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)4.546e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.118e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)9.5e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.73e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)7.309e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.884e-12
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)9.163e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)5.629e-11
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)8.698e-11