Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36877

Metabolite ID
P36877
Deionized mass
802.3931 Da
Average m/z
803.4017
Average RT
18.3515
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)6.046e-11
Glyma.17G215200 hypothetical protein NA 2Chr17:36125880–36142936 (+)3.957e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.261e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.818e-17
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)6.839e-14
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.206e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.121e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.202e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.202e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.559e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.738e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.738e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.738e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.202e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.626e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.246e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.457e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.608e-13
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.608e-13
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.608e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.212e-12
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)2.557e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.564e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)4.596e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.186e-12
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)5.712e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)4.866e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.509e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.509e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.928e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.74e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.103e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.824e-12
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)9.416e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.02e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.312e-13
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)1.23e-12
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)3.957e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)3.957e-11
Glyma.17G213300 hypothetical protein NA 1Chr17:35589559–35592664 (+)3.957e-11
Glyma.17G213600 hypothetical protein AT4G32060:AT4G32060:calcium-binding EF hand family protein 1Chr17:35740625–35746554 (-)3.957e-11
Glyma.17G213700 hypothetical protein AT5G11090:AT5G11090:serine-rich protein-like protein 1Chr17:35767502–35768989 (-)3.957e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)3.957e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.957e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.587e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.587e-11
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)9.618e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)2.072e-11