SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 208 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30069 6-Methoxycrinamine 331.1379 13.157e-11
P30073 gamma-L-Glutamyl-S-(hercyn-2-yl)-L-cysteine S-oxide 461.1614 19.931e-17
P30099 Mespirenone 426.1849 16.336e-12
P30108 Kopsiflorine N(4)-oxide 428.1950 12.561e-11
P30111 Trifoliolasine D 783.2994 11.89e-13
P30140 No candidate annotation 221.1846 14.072e-11
P30142 Hippuryl-histidyl-leucine 429.2007 13.08e-12
P30151 Gelsebanine 504.2614 13.539e-13
P30154 Methyl syramuraldehydate 242.0766 18.578e-12
P30186 No candidate annotation 876.2712 12.208e-13