SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 20 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04048 4-Nitroquinoline N-oxide 190.0393 12.504e-12
P04062 No candidate annotation 320.5888 17.299e-11
P04074 (+)-Indocarbazostatin 511.1419 16.935e-14
P04078 No candidate annotation 311.5769 14.283e-13
P04083 2-[(4-Phenoxyphenyl)sulfonylmethyl]thiirane 306.0384 12.222e-12
P04098 Axisothiocyanate 4 261.1545 15.381e-11
P04106 N-Trifluoroacetyladriamycinol 641.1784 16.483e-12
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 11.668e-18
P04137 Monomethyl phthalate 180.0435 13.697e-11
P04147 Rubomycin F 599.2034 15.253e-16