Overview Annotation GWAS Evidence Associated genes

P04062

Metabolite ID
P04062
Deionized mass
320.5888 Da
Average m/z
321.5963
Average RT
7.9544
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
33
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

33 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.811e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.546e-13
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)5.593e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.589e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.299e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.116e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.034e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)9.122e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)2.022e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.251e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)2.827e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.265e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.265e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.462e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.966e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.966e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.325e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.251e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.114e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.114e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.16e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.708e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.16e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.16e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.891e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.629e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)9.349e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.363e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.801e-15
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)7.293e-14
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.284e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.651e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.651e-16