SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 144 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20852 Edulisin I 490.1562 13.134e-12
P20865 Ethoxychelerythrine 391.1430 14.751e-19
P20889 Xyloglucan Heptasaccharide 1062.3370 11.537e-11
P20898 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1238 19.557e-15
P20905 No candidate annotation 787.3606 13.514e-15
P20935 ES 242-1 604.2297 11.91e-12
P20960 Upunaphenol N 934.2745 16.206e-11
P20973 SB 243213 428.1449 11.394e-15
P20980 Dictyodendrin E 726.1714 11.377e-11
P20987 Cyanidin 3-(6''-malonylglucoside) 534.0975 15.511e-14