SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 142 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20542 12-Dihydrodalbinol O-glucoside 590.1983 19.898e-14
P20549 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1583 11.273e-14
P20561 No candidate annotation 669.1601 11.909e-14
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 12.617e-12
P20611 cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene 192.0788 11.88e-11
P20620 No candidate annotation 396.0681 15.922e-13
P20625 Lamiuside D 816.2663 14.792e-12
P20634 Euphoscopin F 538.2526 12.618e-13
P20641 Oxanthromicin 654.1739 12.38e-11
P20643 No candidate annotation 728.2711 11.258e-12