SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 14 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P02723 N-Acetyl-D-fucosamine 205.0934 15.422e-11
P02741 Parbendazole 247.1324 12.233e-14
P02752 Polanrazine B 377.1240 11.282e-12
P02776 2-Methyl-1-hydroxybutyl-ThPP 510.1202 18.661e-11
P02780 5-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 248.1256 19.447e-16
P02811 No candidate annotation 278.9789 15.258e-14
P02815 Macromomycin B 249.0683 12.038e-11
P02861 Butralin 295.1493 18.283e-15
P02878 5-Methylthio-D-ribose 180.0455 14.445e-15
P02908 3-Hydroxy-2-methylglutaric acid 162.0513 12.002e-11