SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 132 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18890 Rhamnetin 3-rhamnosyl-(1->3)(4'''-acetylrhamnosyl)(1->6)-galactoside 812.2394 17.143e-11
P18899 cis-Zeatin riboside monophosphate 419.1207 11.37e-14
P18917 (6R,8Z)-6-Hydroxy-3-oxotetradecenoic acid 256.1642 13.663e-12
P18935 Marchantin P 438.1840 15.526e-11
P18956 Methyldopate 239.1136 14.304e-11
P18966 Notoamide H 479.2104 12.084e-12
P18970 Deoxypumiloside 496.1831 15.412e-18
P18973 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0870 13.084e-11
P18979 Justalakonin 528.1312 15.427e-16
P19004 5-Hydroxyketamine 253.0879 11.708e-13