Overview Annotation GWAS Evidence Associated genes

P18899

Metabolite ID
P18899
Deionized mass
419.1207 Da
Average m/z
420.1269
Average RT
12.8804
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
38
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

38 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G071200 hypothetical protein NA 4Chr20:25316540–25366827 (+)3.886e-11
Glyma.20G070800 VAD1 AT1G02120:VAD1:GRAM domain family protein 2Chr20:25156336–25176331 (-)3.886e-11
Glyma.20G084900 hypothetical protein NA 2Chr20:31707347–31709780 (-)3.886e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.652e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.696e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.991e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.991e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.37e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.81e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.81e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.81e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.593e-13
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)5.487e-12
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)2.8e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.329e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.948e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.329e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.329e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.845e-11
Glyma.15G140400 hypothetical protein NA 1Chr15:11495189–11495691 (+)8.32e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)4.759e-12
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 1Chr16:6570689–6574950 (+)6.439e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.97e-15
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.973e-13
Glyma.18G009800 hypothetical protein AT3G48140:AT3G48140:B12D protein 1Chr18:702106–703575 (+)5.795e-12
Glyma.20G070100 hypothetical protein NA 1Chr20:24897324–24898925 (-)3.886e-11
Glyma.20G071000 hypothetical protein NA 1Chr20:25298698–25300941 (+)3.886e-11
Glyma.20G074500 hypothetical protein AT2G38710:AT2G38710:AMMECR1 family 1Chr20:26796617–26809116 (-)3.886e-11
Glyma.20G074600 hypothetical protein NA 1Chr20:26803189–26805842 (+)3.886e-11
Glyma.20G076500 hypothetical protein AT1G04780:AT1G04780:Ankyrin repeat family protein 1Chr20:27700886–27708055 (+)3.886e-11
Glyma.20G083800 hypothetical protein NA 1Chr20:31482676–31483763 (-)3.886e-11
Glyma.20G083900 hypothetical protein NA 1Chr20:31503404–31505246 (-)3.886e-11
Glyma.20G084000 hypothetical protein AT4G30220:RUXF:small nuclear ribonucleoprotein F__AT2G14285:AT2G14285:Small nuclear ribonucleoprotein family protein 1Chr20:31536334–31538924 (+)3.886e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)3.886e-11
Glyma.20G084700 hypothetical protein NA 1Chr20:31686813–31687483 (-)3.886e-11
Glyma.20G085000 hypothetical protein NA 1Chr20:31745486–31748473 (-)3.886e-11
Glyma.20G085300 hypothetical protein AT2G33360:AT2G33360:cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527) 1Chr20:31823173–31827117 (+)3.886e-11
Glyma.20G085400 hypothetical protein NA 1Chr20:31828204–31832688 (+)3.886e-11