SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 130 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18541 Bacilosarcin A 491.2279 11.279e-14
P18542 (1R,6R)-6-Hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate 240.0621 11.233e-13
P18553 Ganomastenol C 254.1856 11.558e-12
P18584 ES-242-3 620.2261 18.009e-12
P18585 Thalassemine 298.1034 12.305e-12
P18591 No candidate annotation 704.3079 11.053e-13
P18605 alpha-Calacorene 200.1557 11.346e-13
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 12.14e-11
P18633 Butanedioic acid, octenyl- 228.1353 11.31e-11
P18639 13R-(S-cysteinylglycinyl)-14S-hydroxy-4Z,7Z,9E,11E,16Z,19Z-docosahexaenoic acid 520.2633 11.175e-12