P18639
Metabolite ID
P18639
Deionized mass
520.2633 Da
Average m/z
521.2694
Average RT
12.8094
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
76
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
76 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G147900 | hypothetical protein | NA | 4 | Chr16:30864919–30872425 (+) | 7.725e-13 | |
| Glyma.16G209300 | hypothetical protein | NA | 4 | Chr16:36856833–36863994 (-) | 1.063e-12 | |
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 1.577e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 3 | Chr13:24677399–24693129 (-) | 1.872e-17 | |
| Glyma.16G210200 | hypothetical protein | NA | 3 | Chr16:36933402–36938940 (+) | 9.824e-11 | |
| Glyma.17G218600 | hypothetical protein | NA | 3 | Chr17:36975400–36982812 (-) | 4.093e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.992e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.992e-13 | |
| Glyma.01G231400 | hypothetical protein | AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 | 1 | Chr01:55836387–55840615 (+) | 4.737e-11 | |
| Glyma.01G231900 | hypothetical protein | AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein | 1 | Chr01:55869836–55872417 (+) | 2.108e-11 | |
| Glyma.01G234100 | hypothetical protein | AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr01:56022128–56026001 (+) | 5.22e-14 | |
| Glyma.01G234300 | hypothetical protein | AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein | 1 | Chr01:56040889–56049889 (-) | 5.128e-12 | |
| Glyma.02G193800 | hypothetical protein | AT5G06470:AT5G06470:Glutaredoxin family protein | 1 | Chr02:36706657–36712744 (-) | 3.561e-11 | |
| Glyma.02G205400 | hypothetical protein | AT5G57880:MPS1:multipolar spindle 1 | 1 | Chr02:39040135–39043181 (-) | 1.212e-11 | |
| Glyma.02G303600 | hypothetical protein | NA | 1 | Chr02:47883626–47887124 (-) | 9.211e-11 | |
| Glyma.02G303700 | hypothetical protein | NA | 1 | Chr02:47892900–47896207 (+) | 9.211e-11 | |
| Glyma.02G304000 | hypothetical protein | AT1G51350:AT1G51350:ARM repeat superfamily protein | 1 | Chr02:47908136–47915999 (-) | 9.211e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 6.636e-13 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 1.838e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 6.634e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.823e-11 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.823e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 1.175e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.286e-12 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.286e-12 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.286e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.537e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 3.098e-13 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 4.949e-14 | |
| Glyma.06G084800 | hypothetical protein | NA | 1 | Chr06:6515571–6517480 (-) | 1.168e-11 | |
| Glyma.06G085000 | hypothetical protein | NA | 1 | Chr06:6524339–6529016 (-) | 1.168e-11 | |
| Glyma.06G085100 | hypothetical protein | NA | 1 | Chr06:6531956–6537295 (-) | 1.168e-11 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 7.354e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 1.577e-11 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 1.577e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 1.62e-11 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 1.384e-12 |
| Glyma.08G148500 | hypothetical protein | AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:11362991–11368184 (-) | 1.768e-12 | |
| Glyma.08G239500 | hypothetical protein | AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:20444715–20447665 (-) | 2.156e-12 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1 | Chr09:49863377–49871270 (+) | 3.961e-11 | |
| Glyma.11G182600 | hypothetical protein | AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein | 1 | Chr11:24998933–25003549 (-) | 3.066e-12 | |
| Glyma.11G182700 | hypothetical protein | AT1G32250:AT1G32250:Calcium-binding EF-hand family protein | 1 | Chr11:25028353–25031056 (-) | 3.131e-12 | |
| Glyma.11G182800 | hypothetical protein | AT2G27460:AT2G27460:sec23/sec24 transport family protein | 1 | Chr11:25044939–25052549 (+) | 1.361e-11 | |
| Glyma.11G183800 | hypothetical protein | AT5G22450:AT5G22450:spectrin beta chain, brain | 1 | Chr11:25162867–25173439 (-) | 1.538e-11 | |
| Glyma.11G184400 | hypothetical protein | NA | 1 | Chr11:25256684–25259757 (+) | 4.566e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.562e-13 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.562e-13 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.872e-17 | |
| Glyma.13G134500 | hypothetical protein | AT3G09560:PAH1:Lipin family protein | 1 | Chr13:24696109–24705068 (-) | 2.782e-15 | |
| Glyma.13G135100 | hypothetical protein | AT5G02750:SGR9:RING/U-box superfamily protein | 1 | Chr13:24744740–24746437 (+) | 1.504e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.197e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.197e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.992e-13 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 9.445e-11 | |
| Glyma.15G070100 | hypothetical protein | AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | 1 | Chr15:5355553–5364428 (+) | 3.228e-12 | |
| Glyma.15G071600 | hypothetical protein | AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein | 1 | Chr15:5481672–5488866 (-) | 3.228e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 8.865e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 2.092e-15 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 1.696e-11 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 9.516e-13 | |
| Glyma.16G051100 | hypothetical protein | NA | 1 | Chr16:4896279–4898219 (-) | 9.317e-13 | |
| Glyma.16G051900 | hypothetical protein | NA | 1 | Chr16:5009359–5009660 (+) | 1.037e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 6.674e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 6.254e-12 | |
| Glyma.16G209900 | hypothetical protein | NA | 1 | Chr16:36919141–36924601 (+) | 9.824e-11 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 2.108e-13 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 2.108e-13 | |
| Glyma.17G218700 | hypothetical protein | NA | 1 | Chr17:36986191–36991558 (-) | 4.093e-12 | |
| Glyma.17G221900 | hypothetical protein | AT4G31780:MGD1:monogalactosyl diacylglycerol synthase 1 | 1 | Chr17:37431137–37437980 (+) | 2.127e-11 | |
| Glyma.17G257100 | hypothetical protein | AT1G75660:XRN3:5'-3' exoribonuclease 3 | 1 | Chr17:41113121–41125026 (+) | 2.84e-11 | |
| Glyma.17G258400 | hypothetical protein | AT1G30755:AT1G30755:elongation factor G, putative (DUF668) | 1 | Chr17:41248979–41254225 (+) | 4.909e-11 | |
| Glyma.17G258700 | hypothetical protein | AT4G24190:SHD:Chaperone protein htpG family protein | 1 | Chr17:41280124–41284980 (-) | 1.022e-12 | |
| Glyma.18G091600 | hypothetical protein | NA | 1 | Chr18:9165090–9166656 (-) | 2.495e-12 | |
| Glyma.18G106700 | hypothetical protein | NA | 1 | Chr18:11956201–11957138 (-) | 7.919e-11 | |
| Glyma.18G106800 | hypothetical protein | AT2G42880:MPK20:MAP kinase 20 | 1 | Chr18:11959920–11966545 (-) | 7.919e-11 | |
| Glyma.20G107500 | hypothetical protein | AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr20:35011922–35015196 (-) | 4.541e-11 |