SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 125 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17891 Punicatannin C 660.1708 11.153e-12
P17930 CDP-DG(LTE4/i-12:0) 1080.4515 11.777e-11
P17942 Musacin E 156.0782 11.103e-14
P17964 Chlorochrymorin 316.1034 11.312e-11
P17965 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2192 18.152e-12
P17989 4-Ethyl-2-pentylthiazole 183.1067 14.298e-19
P18005 Lysylserine 233.1390 14.807e-11
P18016 Tulipalin A 98.0361 11.441e-17
P18017 2H-Pyran-2-one 96.0205 12.155e-15
P18024 Cryptospirolepine 504.1919 16.028e-14