SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 115 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16473 (R)-1-O-b-D-glucopyranosyl-1,3-octanediol 308.1811 17.998e-11
P16502 Aristolindiquinone 218.0576 14.991e-11
P16525 Isoginkgetin 7-O-beta-D-glucopyranoside 728.1731 11.599e-13
P16534 Lepidimoide 344.0724 12.992e-13
P16542 alpha-Methylphenylalanine 179.0938 15.211e-12
P16547 Brequinar 375.1067 18.405e-13
P16570 N-[(1S)-1-(Ethoxycarbonyl)-3-phenylpropyl]-L-alanyl-L-proline 3-nitrooxypropyl ester 479.2301 11.732e-12
P16576 L-Cladinose 176.1033 14.254e-12
P16596 Hemiphroside A 668.2303 12.147e-11
P16641 1,7-Dimethylguanosine 311.1222 11.061e-12