SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 107 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P15410 Epicoccin F 456.0445 13.106e-12
P15417 No candidate annotation 577.2031 18.376e-15
P15465 Ripasudil 323.1081 12.273e-14
P15473 No candidate annotation 1158.2834 14.657e-12
P15474 Methyl syramuraldehydate 242.0775 12.115e-13
P15481 1-Methylpiperidin-4-yl butanoate 185.1417 18.758e-11
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 11.65e-12
P15527 (1S,4R)-passicapsin 417.1645 12.542e-13
P15530 2,3-Diphenylbenzofuran 270.1053 11.412e-11
P15537 Methyl 3,4,6-tri-O-galloyl-beta-D-glucopyranoside 650.1012 11.118e-13