P15474
Metabolite ID
P15474
Deionized mass
242.0775 Da
Average m/z
243.0847
Average RT
12.0197
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
117
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
117 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 2.975e-12 | |
| Glyma.08G226000 | hypothetical protein | AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein | 3 | Chr08:18321377–18335864 (-) | 1.016e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 4.437e-12 | |
| Glyma.16G210200 | hypothetical protein | NA | 3 | Chr16:36933402–36938940 (+) | 3.184e-13 | |
| Glyma.17G218600 | hypothetical protein | NA | 3 | Chr17:36975400–36982812 (-) | 1.451e-11 | |
| Glyma.08G122200 | hypothetical protein | NA | 2 | Chr08:9416766–9429995 (-) | 8.929e-12 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 8.929e-12 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 2 | Chr09:49863377–49871270 (+) | 1.603e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 2 | Chr12:36267599–36271584 (+) | 8.698e-17 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2 | Chr12:36289704–36295084 (-) | 1.54e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 8.849e-21 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 4.073e-13 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 8.489e-15 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 2 | Chr16:36806718–36809299 (+) | 9.933e-12 | |
| Glyma.17G211500 | hypothetical protein | AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein | 2 | Chr17:34916813–34922875 (+) | 6.613e-12 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 8.651e-11 | |
| Glyma.01G175500 | hypothetical protein | AT3G50660:DWF4:Cytochrome P450 superfamily protein | 1 | Chr01:51219681–51224948 (+) | 6.232e-11 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 1.248e-11 | |
| Glyma.02G273700 | hypothetical protein | AT5G21040:FBX2:F-box protein 2 | 1 | Chr02:45704557–45706919 (+) | 5.765e-11 | |
| Glyma.02G295900 | hypothetical protein | NA | 1 | Chr02:47375932–47378006 (+) | 1.053e-11 | |
| Glyma.02G296200 | hypothetical protein | AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 | 1 | Chr02:47383044–47395946 (-) | 1.053e-11 | |
| Glyma.02G305900 | hypothetical protein | AT5G35750:HK2:histidine kinase 2 | 1 | Chr02:48055694–48067169 (+) | 3.221e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.869e-14 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 8.695e-11 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 2.09e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 8.592e-11 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 1.61e-12 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 9.807e-13 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.445e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.445e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.115e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 4.094e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 4.094e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 4.094e-13 | |
| Glyma.05G131200 | hypothetical protein | AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr05:32421116–32425198 (-) | 1.249e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 5.767e-13 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 1.646e-12 | |
| Glyma.05G226400 | hypothetical protein | AT4G29140:ADS1:MATE efflux family protein | 1 | Chr05:40480968–40482410 (-) | 1.428e-11 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 5.801e-13 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.154e-15 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 4.004e-13 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 5.339e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 2.855e-13 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 2.855e-13 | |
| Glyma.06G129800 | hypothetical protein | AT5G53030:AT5G53030:uncharacterized protein | 1 | Chr06:10667029–10669377 (+) | 7.931e-11 | |
| Glyma.06G130100 | hypothetical protein | AT3G49290:ABIL2:ABL interactor-like protein 2 | 1 | Chr06:10695256–10699675 (+) | 7.931e-11 | |
| Glyma.06G130300 | hypothetical protein | AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr06:10709045–10716245 (-) | 7.804e-11 | |
| Glyma.06G136200 | hypothetical protein | AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein | 1 | Chr06:11160066–11162505 (-) | 4.363e-12 | |
| Glyma.06G200200 | hypothetical protein | NA | 1 | Chr06:18327920–18331068 (-) | 1.459e-11 | |
| Glyma.06G291600 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr06:48024204–48029614 (+) | 5.42e-11 | |
| Glyma.06G292000 | hypothetical protein | NA | 1 | Chr06:48081084–48084476 (-) | 5.42e-11 | |
| Glyma.06G292100 | hypothetical protein | NA | 1 | Chr06:48095366–48097378 (+) | 5.42e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 2.975e-12 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 2.975e-12 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 3.881e-11 | |
| Glyma.07G078000 | hypothetical protein | NA | 1 | Chr07:7121636–7126695 (+) | 2.441e-11 | |
| Glyma.08G119300 | hypothetical protein | AT1G29330:ERD2:ER lumen protein retaining receptor family protein | 1 | Chr08:9198213–9201688 (-) | 2.055e-11 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 8.929e-12 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 8.929e-12 | |
| Glyma.08G122600 | hypothetical protein | NA | 1 | Chr08:9445153–9450502 (+) | 6.342e-11 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 8.929e-12 | |
| Glyma.08G137600 | hypothetical protein | AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein | 1 | Chr08:10551821–10553620 (-) | 1.827e-12 | |
| Glyma.08G210200 | hypothetical protein | NA | 1 | Chr08:17010526–17012557 (+) | 1.284e-11 | |
| Glyma.08G210300 | hypothetical protein | NA | 1 | Chr08:17011623–17012548 (-) | 1.284e-11 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 6.98e-14 | |
| Glyma.08G226100 | hypothetical protein | AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 | 1 | Chr08:18339384–18347070 (-) | 1.016e-11 | |
| Glyma.08G226400 | hypothetical protein | AT3G13050:NiaP:Major facilitator superfamily protein | 1 | Chr08:18370226–18374060 (-) | 1.016e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.144e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 9.824e-12 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 4.275e-12 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 2.203e-13 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 1.041e-12 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 1.041e-12 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 1.041e-12 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 1.041e-12 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 2.606e-11 | |
| Glyma.12G186200 | hypothetical protein | AT3G44350:NAC061:NAC domain containing protein 61 | 1 | Chr12:34708678–34710549 (+) | 2.304e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 8.698e-17 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 6.752e-11 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 8.476e-11 | |
| Glyma.13G160000 | hypothetical protein | AT3G42170:DAYSLEEPER:BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER | 1 | Chr13:27569790–27575112 (+) | 6.386e-12 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 5.53e-13 |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 1.811e-12 | |
| Glyma.14G083200 | hypothetical protein | NA | 1 | Chr14:7249145–7256947 (-) | 1.34e-11 | |
| Glyma.14G084200 | hypothetical protein | NA | 1 | Chr14:7375402–7379417 (-) | 3.924e-13 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 6.866e-15 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 6.866e-15 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 8.824e-17 | |
| Glyma.14G119800 | hypothetical protein | AT1G43850:SEU:SEUSS transcriptional co-regulator | 1 | Chr14:16751592–16763348 (-) | 5.592e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 4.073e-13 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 8.489e-15 | |
| Glyma.14G201800 | hypothetical protein | AT5G58390:AT5G58390:Peroxidase superfamily protein | 1 | Chr14:46728613–46733836 (+) | 2.845e-11 | |
| Glyma.15G009800 | hypothetical protein | NA | 1 | Chr15:753771–758859 (-) | 4.488e-14 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 2.122e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.267e-11 | |
| Glyma.16G025300 | hypothetical protein | NA | 1 | Chr16:2438122–2440528 (-) | 2.574e-11 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 1 | Chr16:2443212–2450834 (-) | 2.574e-11 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 4.016e-12 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 7.649e-11 | |
| Glyma.16G106300 | hypothetical protein | AT5G23900:AT5G23900:Ribosomal protein L13e family protein | 1 | Chr16:21495147–21497932 (+) | 5.647e-13 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 5.22e-11 | |
| Glyma.16G157200 | hypothetical protein | AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr16:31774664–31777363 (+) | 6.391e-11 | |
| Glyma.16G207900 | hypothetical protein | AT5G08450:AT5G08450:zinc finger CCCH domain protein | 1 | Chr16:36754888–36763450 (+) | 4.39e-11 | |
| Glyma.16G209900 | hypothetical protein | NA | 1 | Chr16:36919141–36924601 (+) | 3.184e-13 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 2.839e-15 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 2.839e-15 | |
| Glyma.17G214600 | hypothetical protein | NA | 1 | Chr17:36049053–36054871 (-) | 4.265e-11 | |
| Glyma.17G215300 | hypothetical protein | AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein | 1 | Chr17:36142245–36146771 (-) | 2.558e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 2.609e-12 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 8.651e-11 | |
| Glyma.17G218700 | hypothetical protein | NA | 1 | Chr17:36986191–36991558 (-) | 1.451e-11 | |
| Glyma.18G055400 | hypothetical protein | NA | 1 | Chr18:4824726–4828902 (+) | 3.643e-11 | |
| Glyma.18G236700 | hypothetical protein | AT3G61490:AT3G61490:Pectin lyase-like superfamily protein | 1 | Chr18:52558809–52562720 (+) | 2.943e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 5.508e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 5.508e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 4.2e-13 | |
| Glyma.20G084500 | hypothetical protein | AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A | 1 | Chr20:31666190–31674959 (-) | 3.13e-11 |