SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 8 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P02046 2-Methyl-4'-(methylthio)-2-morpholinopropiophenone 279.1283 14.64e-13
P02098 No candidate annotation 206.9592 14.667e-13
P02110 No candidate annotation 147.0570 12.46e-12
P02181 Clomesone 235.9597 13.239e-11
P02197 Ponticaepoxide 182.0745 15.847e-12
P02335 Chloroxine 212.9710 14.772e-12
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 11.963e-11
P02590 2-Amino-5-chloromuconate 6-semialdehyde 175.0064 11.472e-13
P02694 Methicillin 380.1047 13.671e-14
P02780 5-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 248.1256 12.282e-15