SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G237000

Description hypothetical protein

Gene interval Chr04:50558708–50569783 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G31910:AT1G31910:GHMP kinase family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features232Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records17

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0733.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

232 matching features · page 15 of 24

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30265 Petromurin A 512.2328 17.235e-11
P30651 4-Methylumbelliferyl beta-D-xylopyranoside 308.0890 14.512e-11
P31022 Pestalotheol B 296.1600 13.812e-12
P31145 Trigoforin 188.0837 14.677e-11
P31327 Aurantiomide A 372.1794 17.592e-11
P31987 No candidate annotation 1185.5382 12.796e-11
P31992 Diacylglycerol kinase inhibitor i 459.1789 12.476e-11
P32080 No candidate annotation 762.2813 15.502e-12
P32791 Tenuecyclamide A 460.0996 16.511e-11
P32813 Namonin A 1184.5216 11.719e-11