SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G116900

Description hypothetical protein

Gene interval Chr04:13696275–13700803 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features754Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

754 matching features · page 7 of 76

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04763 3-[2-[4-(3-Chloro-2-methylphenyl)piperazin-1-yl]ethyl]-5,6-dimethoxy-2H-indazole 414.1822 16.273e-11
P04959 Tetradenolide 214.1201 16.454e-11
P04966 Dihydroxytryptamine 192.0882 12.338e-12
P05115 Methocarbamol 241.0942 13.677e-11
P05243 5'-Deoxy-5'-fluoroadenosine 269.0921 16.327e-12
P05260 No candidate annotation 368.6111 18.298e-11
P05274 3-Ethylphenylsulfate 306.0931 11.932e-12
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 18.495e-11
P05426 No candidate annotation 337.6692 12.379e-11
P05541 Penthiopyrad 359.1276 13.662e-12