Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05274

Metabolite ID
P05274
Deionized mass
306.0931 Da
Average m/z
307.1017
Average RT
8.6869
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
89
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

89 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 4Chr16:30652378–30659548 (+)2.92e-14
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)8.268e-14
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)6.408e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)8.383e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 2Chr12:3949453–3957386 (-)1.326e-15
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)9.307e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)6.535e-13
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 2Chr20:35498179–35500565 (-)2.094e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)6.408e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.108e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)5.475e-11
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)7.003e-11
Glyma.03G028900 hypothetical protein AT3G60730:AT3G60730:Plant invertase/pectin methylesterase inhibitor superfamily 1Chr03:3148672–3152887 (-)5.579e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)7.712e-12
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)5.957e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.556e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.932e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.629e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.358e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)8.524e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)8.523e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)8.523e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.359e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.446e-16
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.938e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.513e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)5.972e-12
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)7.008e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.216e-12
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.609e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.773e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.643e-12
Glyma.11G223200 hypothetical protein NA 1Chr11:31833899–31837181 (+)3.764e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)8.608e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.135e-19
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 1Chr12:3547790–3551313 (+)1.292e-12
Glyma.12G050200 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr12:3600553–3604637 (-)1.292e-12
Glyma.12G054500 hypothetical protein NA 1Chr12:3938604–3943724 (+)1.506e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.488e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.488e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.488e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.488e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.265e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.548e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.452e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.559e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.638e-15
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.071e-11
Glyma.14G211800 hypothetical protein AT1G66080:AT1G66080:hikeshi-like protein 1Chr14:47664851–47670630 (+)2.432e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.706e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.101e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.999e-14
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)4.174e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.131e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)7.977e-13
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.093e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)9.307e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.612e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.105e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.701e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)2.937e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.102e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.932e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.295e-16
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)1.111e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)2.091e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.231e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.364e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)8.663e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)8.213e-12
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)1.054e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)1.055e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)6.536e-13
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)7.764e-13
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)6.536e-13
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)6.253e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)3.432e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)7.947e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)7.946e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.113e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.113e-16
Glyma.19G110800 hypothetical protein NA 1Chr19:36458960–36463094 (-)9.11e-11
Glyma.19G110900 hypothetical protein AT3G03920:AT3G03920:H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 1Chr19:36511164–36513544 (+)9.111e-11
Glyma.19G111000 hypothetical protein AT3G03910:GDH3:glutamate dehydrogenase 3 1Chr19:36534479–36539096 (-)9.111e-11
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)9.766e-14
Glyma.20G100000 Thioredoxin-like fold domain-containing protein MRL7L, chloroplastic AT2G31840:MRL7-L:Thioredoxin superfamily protein 1Chr20:34320945–34324107 (+)6.625e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.195e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)9.951e-12
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)7.231e-11