SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G112200

Description hypothetical protein

Gene interval Chr04:12562882–12565006 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G51750:SBT1.3:subtilase 1.3

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1604Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0019.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1604 matching features · page 132 of 161

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43642 No candidate annotation 2061.0481 15.788e-11
P43702 No candidate annotation 1069.0524 19.035e-11
P43704 3'''-O-Methylfukugetin 570.1129 11.854e-12
P43742 Laetiposide D 646.4088 11.469e-13
P43745 3,15-Diangeloylgermine 673.3707 13.565e-11
P43751 Glutamine glutamate aspartate 565.1548 14.253e-12
P43802 Tetracenomycin E 408.0825 13.485e-12
P43866 Acetyljujuboside B 1086.5706 17.854e-11
P43879 2-Ethylhexyl 4-(dimethylamino)benzoate 277.2090 13.49e-11
P43944 No candidate annotation 1262.4333 12.001e-12