Overview Annotation GWAS Evidence Associated genes

P43702

Metabolite ID
P43702
Deionized mass
1069.0524 Da
Average m/z
1070.0592
Average RT
22.2407
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
137
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

137 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.936e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.79e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)3.073e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)2.524e-17
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)6.727e-14
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)7.017e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)5.057e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)1.471e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.919e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)6.456e-15
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)8.926e-16
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.888e-16
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.179e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.936e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)7.017e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)3.525e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.209e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.23e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.23e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)3.654e-14
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.15e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.639e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.596e-14
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)3.334e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)3.334e-12
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)3.257e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)5.155e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.006e-16
Glyma.03G034200 hypothetical protein NA 1Chr03:3989072–3993561 (+)1.23e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)5.622e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.048e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.468e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)9.035e-11
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)3.948e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)8.333e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.22e-11
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)9.773e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.976e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)4.758e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)7.931e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.068e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.498e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.1e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.078e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)5.891e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)5.891e-12
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)5.431e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.794e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.794e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)3.045e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.21e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)8.187e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.253e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.253e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.999e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)9.001e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.399e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)8.526e-11
Glyma.09G056400 hypothetical protein NA 1Chr09:5080364–5088515 (-)6.471e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.018e-15
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)2.317e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.019e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.188e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.493e-20
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)3.075e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.017e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)7.267e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)7.267e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.861e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.861e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.861e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.861e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.134e-13
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)1.597e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.824e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)9.878e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)9.878e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)9.878e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)9.878e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.485e-15
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)1.665e-11
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)3.728e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)6.816e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.926e-16
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.788e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.79e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.303e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)9.766e-14
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)9.757e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)7.993e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)3.073e-12
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)9.698e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)3.073e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.09e-14
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.614e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.614e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.386e-16
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.179e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.669e-13
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 1Chr15:2950291–2955686 (-)6.076e-11
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 1Chr15:2964304–2967785 (+)3.059e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.304e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.23e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.049e-17
Glyma.15G152000 hypothetical protein NA 1Chr15:12592655–12594969 (+)6.448e-11
Glyma.15G152400 hypothetical protein NA 1Chr15:12641790–12646649 (+)8.437e-12
Glyma.15G154600 hypothetical protein AT2G34900:IMB1:Transcription factor GTE6 1Chr15:12869005–12877308 (-)5.226e-14
Glyma.15G154800 hypothetical protein AT1G30840:PUP4:purine permease 4 1Chr15:12885652–12899379 (+)5.226e-14
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.644e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.411e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.661e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.17e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)4.533e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)8.549e-17
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)1.758e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.24e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.24e-11
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)1.744e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)1.744e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)1.181e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)8.622e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.521e-14
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)2.958e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)4.08e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.032e-11
Glyma.18G252100 hypothetical protein AT1G02090:FUS5:Proteasome component (PCI) domain protein 1Chr18:53885762–53894767 (+)6.266e-11
Glyma.18G257800 hypothetical protein NA 1Chr18:54346048–54349189 (+)2.289e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.884e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)8.833e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.183e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.183e-11
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)6.873e-11
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)6.873e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.39e-13
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.572e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.315e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.717e-12