SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G104400

Description hypothetical protein

Gene interval Chr04:9885009–9889282 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features643Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

643 matching features · page 4 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03433 Melithiazol A 422.1334 17.465e-12
P03533 2-[4-Acetamido-3-(4-chlorophenyl)sulfanyl-2-methylindol-1-yl]acetic acid 388.0646 12.675e-12
P03687 4-Hydroxy-6-methyl-3-(1-oxobutyl)-2H-pyran-2-one 196.0736 15.694e-11
P03792 Meridianin A 226.0868 17.34e-12
P03834 No candidate annotation 120.0280 15.476e-11
P03976 Dilmapimod 456.1404 11.383e-11
P03988 No candidate annotation 189.0592 16.322e-12
P04040 (1R,2R)-2-Amino-1-(4-nitrophenyl)propane-1,3-diol 212.0786 11.165e-11
P04164 Elinafide 520.2115 13.75e-11
P04440 8-Caffeoyl-3,4-dihydro-5,7-dihydroxy-4-phenylcoumarin 418.1053 18.968e-11