SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G097900

Description hypothetical protein

Gene interval Chr04:8857667–8865249 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G65380:AT5G65380:MATE efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features50Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0800.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

50 matching features · page 2 of 5

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10794 Actiketal 289.0951 17.379e-11
P15034 Newbouldiaquinone A 410.0836 15.664e-11
P15229 2'-O-(alpha-D-Manp)-(1-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phospho-1'-myo-inositol) 758.3360 11.538e-11
P16984 N-D-Glucosylarylamine 255.1088 11.314e-11
P17288 Naphthoquinomycin B 717.3103 17.447e-11
P17942 Musacin E 156.0782 16.914e-11
P20147 Shoreaphenol 466.0991 17.631e-12
P21748 Saframycin B 537.2153 12.557e-11
P22541 2',4'-Dihydroxy-6'-methoxy-3'-(2-hydroxybenzyl)-5'-(3 x 2-hydroxybenzyl)dihydrochalcone 696.2724 16.948e-11
P23322 Ergostine 595.2819 16.074e-11