Overview Annotation GWAS Evidence Associated genes

P21748

Metabolite ID
P21748
Deionized mass
537.2153 Da
Average m/z
538.2189
Average RT
13.6760
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
36
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

36 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.517e-13
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)5.958e-13
Glyma.20G013100 hypothetical protein NA 2Chr20:1134080–1135710 (-)3.361e-14
Glyma.20G099500 hypothetical protein AT3G12590:AT3G12590:uncharacterized protein 2Chr20:34275736–34292214 (-)3.149e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.843e-12
Glyma.02G253300 hypothetical protein NA 1Chr02:44063023–44065910 (-)1.404e-12
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)2.557e-11
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 1Chr04:8887523–8888545 (-)6.108e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.942e-13
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)7.98e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.6e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.889e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.889e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.366e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.366e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.366e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.366e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)4.073e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.412e-12
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)3.521e-11
Glyma.09G052100 hypothetical protein AT3G22230:AT3G22230:Ribosomal L27e protein family 1Chr09:4536612–4538089 (+)5.411e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)2.378e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)2.344e-12
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)2.344e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.219e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.207e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.028e-15
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)5.349e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.536e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.592e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)8.927e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)5.443e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)7.808e-11
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)5.487e-15
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.361e-11
Glyma.20G099600 hypothetical protein AT3G55400:OVA1:methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS) 1Chr20:34295547–34302938 (+)3.149e-11