Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P20147

Metabolite ID
P20147
Deionized mass
466.0991 Da
Average m/z
467.1044
Average RT
13.2281
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)3.774e-11
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)1.657e-11
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 2Chr04:8887523–8888545 (-)1.015e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.187e-13
Glyma.17G153900 hypothetical protein AT5G46580:AT5G46580:pentatricopeptide (PPR) repeat-containing protein 2Chr17:12919733–12922117 (-)7.62e-13
Glyma.02G044400 hypothetical protein NA 1Chr02:4121809–4127068 (+)4.109e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.887e-15
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)5.961e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)7.505e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)5.442e-11
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)6.316e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.838e-11
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)2.627e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)9.536e-13
Glyma.04G096300 hypothetical protein NA 1Chr04:8635554–8654734 (+)4.866e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)3.774e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)3.774e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)3.774e-11
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)7.631e-12
Glyma.04G098300 hypothetical protein NA 1Chr04:8910522–8912389 (-)1.015e-11
Glyma.04G098400 hypothetical protein AT1G22490:AT1G22490:basic helix-loop-helix (bHLH) DNA-binding superfamily protein__AT1G72210:AT1G72210:basic helix-loop… 1Chr04:8914410–8916406 (+)2.366e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.836e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)6.912e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.142e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.623e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.623e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.623e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.134e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)3.592e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)3.592e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)3.592e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.431e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.187e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.187e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.187e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.187e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.967e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.51e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.51e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.968e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.968e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.968e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.82e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.083e-11
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 1Chr15:2950291–2955686 (-)9.812e-11
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 1Chr15:2964304–2967785 (+)6.719e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)7.978e-12
Glyma.17G154000 hypothetical protein NA 1Chr17:12924078–12925703 (+)5.408e-12
Glyma.17G154300 hypothetical protein AT5G46610:AT5G46610:aluminum activated malate transporter family protein 1Chr17:12986575–12990804 (-)7.152e-13
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)1.853e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)2.618e-13
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)5.839e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)5.839e-11