SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G086600

Description hypothetical protein

Gene interval Chr04:7374806–7380808 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1022Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records37

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0362.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1022 matching features · page 94 of 103

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P47597 Saptomycin D 615.2377 12.319e-14
P47617 (15Z)-15-Nitro-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione 641.3622 15.633e-13
P47621 2-Aminobiphenyl 169.0901 13.803e-12
P47637 No candidate annotation 90.0461 11.418e-12
P47659 LysoPI(20:0/0:0) 628.3567 18.906e-13
P47704 1-(13Z,16Z-docosadienoyl)-2-(9Z-heptadecenoyl)-glycero-3-phospho-(1'-myo-inositol) 902.5883 16.402e-12
P47782 No candidate annotation 195.5872 11.065e-12
P47883 No candidate annotation 204.5891 15.863e-11
P48063 No candidate annotation 203.5863 19.279e-12
P48077 PA(12:0/18:2(10E,12Z)+=O(9)) 630.3850 11.679e-11