Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47782

Metabolite ID
P47782
Deionized mass
195.5872 Da
Average m/z
196.5940
Average RT
24.9196
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G019800 hypothetical protein AT1G51940:LYK3:protein kinase family protein / peptidoglycan-binding LysM domain-containing protein 2Chr15:1540655–1547540 (-)1.389e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.106e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.506e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.203e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)6.946e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)6.946e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)6.946e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)6.946e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)6.946e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)6.946e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)6.946e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.778e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.159e-12
Glyma.03G008300 hypothetical protein AT4G00400:GPAT8:glycerol-3-phosphate acyltransferase 8 1Chr03:801855–806650 (-)6.404e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)5.924e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.984e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)8.838e-16
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.671e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)1.456e-11
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)7.558e-14
Glyma.04G083600 hypothetical protein NA 1Chr04:7048192–7052947 (-)4.983e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.809e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.037e-13
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)7.205e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.065e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)5.648e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.508e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.248e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.572e-12
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)5.025e-12
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 1Chr12:2597690–2600977 (+)3.001e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)6.43e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)6.43e-11
Glyma.13G067900 hypothetical protein NA 1Chr13:16787469–16789119 (+)1.462e-11
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)8.256e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)8.313e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)7.203e-12
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)2.332e-11
Glyma.15G019700 hypothetical protein AT3G21360:AT3G21360:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr15:1539104–1541259 (+)1.389e-13
Glyma.15G020800 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr15:1605458–1610034 (-)6.2e-13
Glyma.15G021000 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr15:1616486–1626531 (-)6.2e-13
Glyma.15G021800 hypothetical protein AT4G29990:AT4G29990:Leucine-rich repeat transmembrane protein kinase protein 1Chr15:1711831–1716516 (+)8.693e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)9.134e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)7.453e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.378e-11
Glyma.20G027600 hypothetical protein NA 1Chr20:3140862–3142270 (+)9.122e-11