SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G086600

Description hypothetical protein

Gene interval Chr04:7374806–7380808 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1022Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records37

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0362.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1022 matching features · page 100 of 103

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52233 No candidate annotation 232.6061 15.243e-12
P52273 2-O-[2-O-(alpha-D-Mannopyranosyl)-alpha-D-glucopyranosyl]-3-phospho-D-glycerate 510.0995 11.179e-11
P52281 Albovionitine 389.2567 18.892e-12
P52401 Candicanoside A 720.4006 15.717e-11
P52792 Pegvaliase 318.2154 12.178e-12
P52922 Malachite green 328.1969 19.46e-14
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 12.158e-12
P53176 No candidate annotation 258.8967 16.234e-12
P53239 13R-(S-cysteinylglycinyl)-14S-hydroxy-4Z,7Z,9E,11E,16Z,19Z-docosahexaenoic acid 520.2630 14.549e-12
P53402 4-Vinylcyclohexene 108.0925 18.35e-12