SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G084800

Description hypothetical protein

Gene interval Chr04:7187985–7192897 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G11630:NOXY2:uncharacterized protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features836Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records518

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6555.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

836 matching features · page 64 of 84

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19069 No candidate annotation 353.5640 14.011e-11
P19081 2-Methyl-1-hydroxybutyl-ThPP 510.1174 11.338e-11
P19597 2-(N-Morpholino)-ethanesulfonic acid 195.0566 15.976e-11
P19675 No candidate annotation 518.0099 14.953e-11
P19910 Alantrypinone 372.1253 13.187e-11
P19921 Gaboroquinone A 450.0941 19.621e-11
P19938 Majidine 644.1728 15.15e-11
P20154 N-Acetyl-serylaspartic acid 262.0803 12.636e-11
P20194 3-Methyldioxyindole 163.0647 18.996e-11
P20649 Isochamanetin 362.1091 19.397e-11