Overview Annotation GWAS Evidence Associated genes

P20154

Metabolite ID
P20154
Deionized mass
262.0803 Da
Average m/z
263.0878
Average RT
13.2293
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)1.718e-12
Glyma.06G204000 hypothetical protein NA 2Chr06:19150094–19154260 (+)8.954e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.172e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)2.636e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)5.355e-14
Glyma.06G203200 hypothetical protein AT2G33040:ATP3:gamma subunit of Mt ATP synthase 1Chr06:18993405–18999399 (+)8.145e-13
Glyma.06G203800 hypothetical protein NA 1Chr06:19090082–19094822 (-)9.413e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)3.93e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.025e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)2.417e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)2.717e-11