SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G084800

Description hypothetical protein

Gene interval Chr04:7187985–7192897 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G11630:NOXY2:uncharacterized protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features836Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records518

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6555.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

836 matching features · page 19 of 84

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 24.742e-11
P16859 Eterobarb 320.1359 23.508e-12
P16866 C75 trans 254.1498 23.872e-11
P16968 No candidate annotation 589.2766 21.247e-11
P17054 Albendazole 2-aminosulphone 312.0873 29.183e-12
P17174 No candidate annotation 311.0676 26.981e-14
P17251 Kaempferol 3-(2G-xylosylrutinoside)-7-glucoside 888.2591 21.729e-13
P17257 Clibadiolide 778.3857 24.284e-11
P17302 Candoxatrilat 399.2291 25.082e-11
P17333 1-(1-methylethenyl)-3-(1-methylethyl)-benzene 160.1239 24.123e-11