SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G064500

Description hypothetical protein

Gene interval Chr04:5367346–5372857 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features82Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records74

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0244.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

82 matching features · page 2 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01578 3-Butene-1,2-diol 88.0524 27.746e-11
P02046 2-Methyl-4'-(methylthio)-2-morpholinopropiophenone 279.1283 26.233e-11
P03155 (Z)-1-(Methylthio)-5-phenyl-1-penten-3-yne 188.0664 25.613e-12
P03648 No candidate annotation 348.6664 23.469e-11
P03955 Methylfurfuryl alcohol 112.0518 22.566e-11
P04170 Allithiamine 354.1180 23.29e-11
P04202 Cysteine 121.0179 25.455e-11
P04426 Opuntioside I 318.0923 22.916e-11
P04498 3-Methylmuconolactone 156.0428 28.654e-12
P05033 Fluridone 329.1035 24.088e-11