SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G063900

Description hypothetical protein

Gene interval Chr04:5310107–5313853 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features459Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

459 matching features · page 5 of 46

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05028 dTDP-2,3,6-trideoxy-3-C-methyl-4-O-methyl-3-nitroso-beta-L-arabino-hexopyranose 573.1149 11.237e-13
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 16.477e-11
P05464 Tauropine 197.0369 18.494e-11
P05529 6-Hydroxypentadecanedioic acid 288.1963 15.755e-11
P05561 Lilly 117018 459.1466 18.217e-14
P05572 Cyclobis-1,6-alpha-nigerosyl 648.2129 11.859e-11
P05580 Pefloxacin 333.1508 12.146e-12
P05582 2-Phenyl-3,4-dihydro-2H-thiochromene 226.0823 11.122e-12
P05649 Tropate 166.0631 11.709e-12
P05675 No candidate annotation 172.0803 15.126e-13