Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05529

Metabolite ID
P05529
Deionized mass
288.1963 Da
Average m/z
289.2025
Average RT
8.7580
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.709e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.754e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.908e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.402e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.055e-11
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)7.472e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)3.683e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)8.025e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.888e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.91e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.483e-14
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.208e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.755e-11
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)2.58e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.243e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.022e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.604e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)9.008e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.754e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.754e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.754e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.754e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.725e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)9.435e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.129e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)7.353e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)7.259e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.393e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.055e-11
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)8.429e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.451e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.451e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.333e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.276e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.333e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.333e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.21e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.298e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.724e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.724e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)3.683e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.49e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)7.392e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.351e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.351e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)8.894e-11