SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G242800

Description hypothetical protein

Gene interval Chr03:44064511–44073939 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G08630:AT4G08630:fas-binding factor-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features454Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records117

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2577.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

454 matching features · page 43 of 46

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48001 1-dodecyl-2-acetyl-sn-glycero-3-phosphocholine 467.2965 14.571e-12
P48323 1-Oleoylglycerophosphocholine 521.3420 18.282e-15
P48424 F 11334A1 212.1040 16.265e-11
P48444 Dihydrogeranylgeranyl diphosphate 452.2099 15.001e-11
P48655 Hypodematine 247.0963 19.016e-11
P48839 Glucoerysodine 461.2083 16.049e-12
P48864 3,4,3',4'-Tetradehydro-psi,psi-caroten-16,16'-dial 560.3678 16.699e-11
P49006 PG(18:2(9Z,11E)+=O(13)/i-13:0) 718.4424 15.142e-11
P49348 Tirandamycin C 387.2085 18.96e-11
P49511 FO 2546F 587.3618 15.284e-11