SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G039900

Description hypothetical protein

Gene interval Chr03:4988423–4991582 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features61Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0164.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

61 matching features · page 5 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39283 Naphthomycinol 687.3469 12.841e-11
P41586 Combreglucoside 682.3912 11.434e-13
P42339 PE(22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)/20:4(8Z,11Z,14Z,17Z)) 843.4977 17.687e-11
P43405 Scutebarbatine H 469.2041 19.22e-12
P43543 26-O-beta-D-glucopyranosyl-(25R)-furost-5,16(17),20(22)-trien-3beta,26-diol-3-O-alpha-l-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside 882.4555 14.419e-11
P44266 Tylosin B 771.4372 12.771e-11
P44407 2-[[9-(1-Methylethyl)-6-[(phenylmethyl)amino]-9H-purin-2-yl]amino]-1-butanol 354.2160 15.073e-11
P44457 Montanastatin 740.4230 17.347e-11
P44943 Asparagoside C 740.4321 13.977e-11
P45703 No candidate annotation 566.3776 17.594e-13