SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G021600

Description hypothetical protein

Gene interval Chr03:2240686–2246512 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family 704, subfamily A, polypeptide 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features588Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records101

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2177.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

588 matching features · page 6 of 59

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13824 (2S)-2-Amino-3-[4-[(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]oxyphenyl]propanoic acid 367.1509 27.656e-12
P13827 (3-Nitrobenzoyl)alanine 238.0564 21.445e-12
P14841 Israpafant 488.1844 22.811e-11
P15114 No candidate annotation 831.2649 26.128e-13
P15723 Histidyltryptophan 341.1496 24.668e-14
P15798 Myricanol 5-beta-sophoroside 682.2812 28.276e-13
P16775 PA(10:0/13:0) 522.3343 21.113e-11
P18553 Ganomastenol C 254.1856 22.64e-11
P18589 Myxochelin C 539.1819 25.048e-13
P22363 1-(9Z-octadecenoyl)-2-(5-oxo-valeroyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 608.3335 23.365e-13