SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G019700

Description hypothetical protein

Gene interval Chr03:2010835–2018418 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G61130:GAUT1:galacturonosyltransferase 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features340Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

340 matching features · page 31 of 34

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44811 Fargoside D 778.4074 12.464e-13
P45107 3-O-(beta-D-glucopyranosyl)-2beta,3beta,6,20,22R-pentahydroxy-cholest-5,8,14-trien-7-one 622.3313 16.405e-12
P45177 Fargoside D 778.4081 15.65e-12
P45201 Reduced ketanserin 397.1809 19.494e-13
P45564 No candidate annotation 571.8545 13.758e-11
P45760 Buxmicrophylline H 598.3926 16.153e-11
P46130 AMD 070 349.2298 13.711e-14
P46563 24-dimethoxy-3beta,6beta,19alpha-trihydroxyurs-12-en-28-oic acid 548.3660 11.003e-13
P46593 Chrotacumine B 387.1647 12.04e-11
P47122 3-[1-[3-(Dimethylamino)propyl]-5-methoxy-1H-indol-3-yl]-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione 442.2002 11.477e-11