SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G018600

Description hypothetical protein

Gene interval Chr03:1859210–1862572 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45695:AT2G45695:Ubiquitin related modifier 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features641Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

641 matching features · page 63 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53116 No candidate annotation 243.8782 17.55e-15
P53196 Toddacoumalone 513.2126 12.904e-11
P53229 Leurubicin 656.2476 12.936e-13
P53413 Tetradecyl nicotinate 319.2477 12.375e-12
P53450 Estradiol 17-O-Octadecanoate 538.4361 11.973e-11
P53567 No candidate annotation 376.3157 14.428e-11
P53612 No candidate annotation 623.7481 12.807e-11
P53685 2beta,3beta-Dihydroxy-6-oxo-5alpha-cholan-24-oic Acid 406.2663 11.218e-11
P53720 Ustiloxin D 494.2378 12.374e-11
P53747 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2443 14.424e-13