P53685
Metabolite ID
P53685
Deionized mass
406.2663 Da
Average m/z
407.2746
Average RT
30.2619
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.07G095000 | hypothetical protein | NA | 3 | Chr07:8843665–8855430 (+) | 7.268e-11 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 9.662e-13 | |
| Glyma.20G218500 | hypothetical protein | AT4G10465:AT4G10465:Heavy metal transport/detoxification superfamily protein__AT2G18196:AT2G18196:Heavy metal transport… | 2 | Chr20:45428471–45432099 (+) | 4.939e-13 | |
| Glyma.03G018600 | hypothetical protein | AT2G45695:AT2G45695:Ubiquitin related modifier 1 | 1 | Chr03:1859210–1862572 (-) | 1.218e-11 | |
| Glyma.03G018800 | hypothetical protein | AT2G45680:TCP9:TCP family transcription factor | 1 | Chr03:1875182–1876855 (+) | 1.735e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 9.452e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 2.897e-12 | |
| Glyma.03G022900 | hypothetical protein | NA | 1 | Chr03:2409690–2420328 (-) | 7.726e-11 | |
| Glyma.06G079400 | hypothetical protein | NA | 1 | Chr06:6105463–6107101 (+) | 2.753e-11 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 6.082e-11 | |
| Glyma.06G136200 | hypothetical protein | AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein | 1 | Chr06:11160066–11162505 (-) | 1.646e-12 | |
| Glyma.07G093700 | hypothetical protein | AT3G18290:BTS:zinc finger protein-like protein | 1 | Chr07:8723740–8734056 (-) | 7.276e-11 | |
| Glyma.08G139300 | hypothetical protein | AT2G22125:CSI1:binding protein | 1 | Chr08:10653279–10664544 (-) | 3.202e-15 | |
| Glyma.10G263800 | hypothetical protein | AT1G23010:LPR1:Cupredoxin superfamily protein | 1 | Chr10:48805999–48811533 (-) | 6.182e-11 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 1.544e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 2.593e-11 | |
| Glyma.14G072200 | Ipk1 | AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… | 1 | Chr14:6059598–6063755 (-) | 3.583e-14 | |
| Glyma.16G040700 | hypothetical protein | AT3G03890:AT3G03890:FMN binding protein | 1 | Chr16:3825551–3830340 (-) | 1.858e-11 | |
| Glyma.16G041000 | hypothetical protein | AT5G18140:AT5G18140:Chaperone DnaJ-domain superfamily protein | 1 | Chr16:3852109–3856099 (+) | 1.858e-11 | |
| Glyma.16G041200 | gdh1 | AT3G03910:GDH3:glutamate dehydrogenase 3__AT5G18170:GDH1:glutamate dehydrogenase 1 | 1 | Chr16:3861427–3869280 (+) | 1.858e-11 | |
| Glyma.16G041700 | hypothetical protein | AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 | 1 | Chr16:3909907–3912569 (+) | 6.028e-14 | |
| Glyma.16G041800 | hypothetical protein | NA | 1 | Chr16:3914214–3917387 (-) | 2.417e-12 | |
| Glyma.16G042100 | hypothetical protein | NA | 1 | Chr16:3931670–3933390 (-) | 7.841e-13 | |
| Glyma.16G042200 | hypothetical protein | AT2G23840:AT2G23840:HNH endonuclease | 1 | Chr16:3933842–3940818 (+) | 7.841e-13 | |
| Glyma.16G042600 | hypothetical protein | AT5G18230:AT5G18230:transcription regulator NOT2/NOT3/NOT5 family protein | 1 | Chr16:3964264–3976083 (-) | 5.225e-12 | |
| Glyma.16G042700 | hypothetical protein | AT1G08570:ACHT4:atypical CYS HIS rich thioredoxin 4 | 1 | Chr16:3982381–3984873 (-) | 3.378e-12 | |
| Glyma.20G218700 | hypothetical protein | AT5G47520:RABA5a:RAB GTPase homolog A5A | 1 | Chr20:45447355–45452750 (-) | 1.682e-12 | |
| Glyma.20G222800 | hypothetical protein | AT3G04760:AT3G04760:Pentatricopeptide repeat (PPR-like) superfamily protein | 1 | Chr20:45748122–45750353 (+) | 1.726e-13 | |
| Glyma.20G235300 | hypothetical protein | AT1G09060:AT1G09060:JmjC domain protein JMJ24 | 1 | Chr20:46790436–46798140 (-) | 8.252e-12 | |
| Glyma.20G235400 | hypothetical protein | AT4G34910:AT4G34910:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr20:46801199–46803834 (-) | 8.252e-12 |